Revert "Issue #1331486 by katbailey, chx, sun, beejeebus, amateescu: Move module_invoke_*() and friends to an Extensions class. Broke core tests after commit."

This reverts commit c80c3e18.

Issue #1331486 by katbailey, chx, sun, beejeebus, amateescu: Move module_invoke_*() and friends to an Extensions class.

Issue #1460764 by klausi: Missing test coverage for a D7 install with non-required modules installed but disabled.