Changed the section / zone configuration in the theme-settings UI. Zones can no longer be disabled, instead they can be moved out of regions. Zones dont have their own vertical tab anymore, instead they are being configured 'inline' inside of the section configuration.

Improved the section wrappers in the theme settings UI and added some wrapper functions in the omega.inc

Fixed a bug in the hook registry (was completly broken) and removed the fake blocks (those will be part of omega ui)

Started to add comments and documentation to alpha.inc - Fixed some minor 'bug' while reading through the code.

Added support for disabling / excluding core, contrib module and theme stylesheets[] definitions via the Omega / Alpha theme settings

Added support for all Alpha 'fake blocks' / Added page title in region--content.tpl.php in Omega / Moved all tpl.php files in Alpha and Omega from  and  to  (drupal_attributes) / Added a few more &drupal_static's to the functions in alpha.inc / Improved alpha_include_grid() / Some preprocess & process tweaks

updating branding block to respect visibility settings for site name and slogan via element-invisible class

adding default text.css to Omega, setting up Alpha with a first pass at rendering the faked branding block; needs review & refining

variable_get was being called 10s of times in alpha_invoke on the theme load. Saving  as a static variable reduces the variable_get calls down to one on theme load.

adding default css resets for core; updating theme settings ui to wrap zones & regions inside their section container

Tweaking the regions preprocessor to exclude 'artificially' created regions which are not part of alpha

Added viewport scaling support. Primary regions now consume the empty column space in a zone - Visual ordering for primary regions doesn't work yet

Now all DEFAULT grids have the proper debugging images for 12, 16 and 24 columns. Also removed a minor bug with the inline CSS

Came up with a concept for debugging the different column counts: Inline CSS. Since we only add it for debugging purpose noone has to worry about it actually being inline. It also makes the rest of the code faster (when not in debugging mode).